Man pages for Scavetta/ComPrAn
Complexome Profiling Analysis package

allPeptidesPlotCreate scatter plot
assignClustersCreate a data frames with cluster assignment
cleanDataClean raw peptide complexomics data
clusterCompCreate components necessary for clustering
compranAppExecute the complexomics Shiny app
exportClusterAssignmentsCovert clustered tables into format for export
extractRepPepsExtract Only Data Belonging to Representative Peptide
getNormTableGet normalised table for all proteins
groupHeatMapMake heatmap
makeBarPlotClusterSummaryTitle
makeDistMake disstance matrix
normalizeTableConvert extractRepPeps output to a Matrix
normTableForExportConvert Normalized Dataframe to Export format
normTableWideToLongConvert Normalized Dataframe To Long format
oneGroupTwoLabelsCoMigrationCompare a Single Group of Proteins Between Two Label States
onlyInOneLabelStateReport Proteins Present In Only One Label State
peptideImportImport raw peptide complexomics data
pickPeptideSelect Top Peptide For Various Scenarios
proteinPlotCreate Line Plots
protImportForAnalysisModify import protein data
simplifyProteinsSimplify Raw Proteins file
splitModLabSplit Modification and Label tags
toFilterOptional Filtering For Raw Data
twoGroupsWithinLabelCoMigrationCompare a Two Groups of Proteins Within One Label State
uncenteredCorPerform uncentered correlation
Scavetta/ComPrAn documentation built on Oct. 3, 2022, 1:08 a.m.