README.md

In ShaoxunLiu/proteinStructureBoost: Generate Boosting Model for Structured Protein

proteinStructureBoost

Package for boosting machine learning models for function/family recognition using protein structures.

Usage

install.packages('devtools') 
devtools::install_github('ShaoxunLiu/proteinStructureBoost') 
library(proteinStructureBoost) 

Inputs to prepare

List of pdb ids for positive and nagative labels.

Procudure

fM <- featureMatrix(postive, negative) 
model <- adaboostTrain(fM)

ShaoxunLiu/proteinStructureBoost documentation built on Dec. 18, 2021, 1:05 p.m.