barplotEnrich: Barplot the enrichResult

In Sharonxiaoyuan/eegc: Engineering Evaluation by Gene Categorization (eegc)

Barplot the enrichResult

Description

This function is revised from the barplot.enrichResult function DOSE package, and used to perform a barplot of the enrichResult object.

Usage

barplotEnrich(height, x = "Count", colorBy = "p.adjust", top = 5,
font.size = 12, title = "", color = NULL,...)

Arguments

height	enrichResult object, alternatively output from functionEnrich function.
x	one of "Count" and "GeneRatio" to specify the x axis.
colorBy	one of 'pvalue', 'p.adjust', 'qvalue'.
top	number of top categories to show.
font.size, title	font size and title.
color	the color of the bar.
...	see parameters in fortify function.

Value

bar plot of enrichment results

Examples

## Not run: 
  # plot the "enrichResult" of Inactive category
  inactive = goenrichraw[[2]]
  barplotEnrich(inactive, top =5, color ="#2c7bb6", title = "Inactive")
  
## End(Not run)

Sharonxiaoyuan/eegc documentation built on April 17, 2022, 2:10 a.m.