solve_opt1D: RK45DP7 solver for 1D ODE optimisation routine.

In SharpRT/NFRR_Philippines: NFRRPhilippines

Description

RK45DP7 solver for 1D ODE optimisation routine reporting at time points determined by sampling dates. Initial condition I=0. Parameters to be excluded-from/fixed-in optimisation routine given in args.

Usage

solve_opt1D(params, DAT, tColStr, N0, plotArea = 1, args = NULL, func, solved)

Arguments

params	named vector of parameters
DAT	experimental data to obtain sampling dates
tColStr	name of matrix's column to be used as measure of time, e.g. "DAT"
N0	initial conditions of the model's state variables
args	parameters to be fixed throughout optimisation
...	unmodified parameters (incl. func) to be passed to the model

Value

solution of deterministic model at given time points

SharpRT/NFRR_Philippines documentation built on Dec. 18, 2021, 1:05 p.m.