API for Shedimus/NanoStringDiff
Differential Expression Analysis of NanoString nCounter Data
| Global functions | |
|---|---|
| NanoStringData | Man page |
| NanoStringDataNormalization | Man page Source code |
| NanoStringDataNormalization,NanoStringDataNormalization-method | Man page |
| NanoStringDiff | Man page |
| NanoStringDiff-package | Man page |
| NanoStringSet | Man page |
| NanoStringSet-class | Man page |
| PlotsPositiveHousekeeping | Man page Source code |
| PlotsPositiveHousekeeping,PlotsPositiveHousekeeping-method | Man page |
| background_threshold | Source code |
| compute.baseSigma | Source code |
| createNanoStringSet | Man page Source code |
| createNanoStringSetFromCsv | Man page Source code |
| est.dispersion | Source code |
| estNormalizationFactors | Man page Source code |
| estNormalizationFactors,estNormalizationFactors-method | Man page |
| fun5 | Source code |
| glm.LRT | Man page Source code |
| glm.LRT,NanoStringSet-method | Man page |
| glmfit.OneGroup | Source code |
| glmfit.full | Source code |
| glmfit.reduce | Source code |
| housekeepingControl | Man page |
| housekeepingControl,NanoStringSet-method | Man page |
| housekeepingControl<- | Man page |
| housekeepingControl<-,NanoStringSet,matrix-method | Man page |
| housekeepingFactor | Man page |
| housekeepingFactor,NanoStringSet-method | Man page |
| housekeepingFactor<- | Man page |
| housekeepingFactor<-,NanoStringSet,numeric-method | Man page |
| negativeControl | Man page |
| negativeControl,NanoStringSet-method | Man page |
| negativeControl<- | Man page |
| negativeControl<-,NanoStringSet,matrix-method | Man page |
| negativeFactor | Man page |
| negativeFactor,NanoStringSet-method | Man page |
| negativeFactor<- | Man page |
| negativeFactor<-,NanoStringSet,numeric-method | Man page |
| positiveControl | Man page |
| positiveControl,NanoStringSet-method | Man page |
| positiveControl<- | Man page |
| positiveControl<-,NanoStringSet,matrix-method | Man page |
| positiveFactor | Man page |
| positiveFactor,NanoStringSet-method | Man page |
| positiveFactor<- | Man page |
| positiveFactor<-,NanoStringSet,numeric-method | Man page |
| rnegbinom | Source code |
