Instructions_for_installing_the_SAVI_R_package.md

How to install the SAVI R package from GitHub

This is an alternative to using the online version at https://savi.shef.ac.uk/SAVI/.

If you have any difficulties downloading and running the SAVI R Package please let us know via savi@sheffield.ac.uk.

These instructions are for Windows, Mac and Linux

Initial set up (this only needs to be done once)

1) Download R from http://cran.rstudio.com/ and install.

2) Install the devtools package from CRAN, either by typing: install.packages('devtools') into the console, or via the Tools > Install Packages menu if using RStudio .

3) Load the devtools package via the command: library(devtools)

Windows users may be prompted to install Rtools. You do not need Rtools to install SAVI.

4) Install the SAVI package via: install_github('Sheffield-Accelerated-VoI/SAVI-package')

The SAVI report download feature requires Pandoc. Pandoc can be downloaded and installed from http://pandoc.org/.

Pandoc is not essential for the rest of SAVI to work.

Running SAVI

Type the following two lines into the console:

library(SAVI)

SAVI()

SAVI should open in your machine's default web browser. The analysis is processed entirely on your own machine.

Mark Strong

23rd November 2015



Sheffield-Accelerated-VoI/SAVI-package documentation built on Feb. 19, 2025, 3:21 p.m.