build_sub_matrix: Build a Substitution Matrix
In ShixiangWang/CNVMotif: Explore, Analyze and Visualize Catalogs and Patterns of Copy Number Variation in Cancer Genomics
View source: R/build_sub_matrix.R
build_sub_matrix R Documentation
Build a Substitution Matrix
Description
Build a Substitution Matrix
Usage
build_sub_matrix(simple_version = FALSE, max_len_score = 4L)
Arguments
simple_version
if TRUE, just use segmental copy number value.
max_len_score
the maximum score for segment length (should >=4).
The maximum score for copy number value is 6 (cannot be changed).
Value
a list.
Examples
sub_list <- build_sub_matrix()
sub_list2 <- build_sub_matrix(simple_version = TRUE)
ShixiangWang/CNVMotif documentation built on June 3, 2022, 3:44 a.m.
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View source: R/build_sub_matrix.R
| build_sub_matrix | R Documentation |
Build a Substitution Matrix
Description
Build a Substitution Matrix
Usage
build_sub_matrix(simple_version = FALSE, max_len_score = 4L)
Arguments
simple_version |
if |
max_len_score |
the maximum score for segment length (should >=4). The maximum score for copy number value is 6 (cannot be changed). |
Value
a list.
Examples
sub_list <- build_sub_matrix() sub_list2 <- build_sub_matrix(simple_version = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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