Files in ShixiangWang/iProfile
integrated cancer Profile using multiple datasets

.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/allClasses.R R/allFunctions_constructExprSet.R R/allGenerics.R R/allMethods.R R/data.R R/pkgname.R R/preprocessRawData.R R/update_refData.R README.md
data/hugo.rda
data/platformMap.rda
iProfile.Rproj
inst/extdata/HUGO_GENES_ALL_20180101.txt
inst/extdata/platformMap.txt
inst/tests/downloadData.R inst/tests/prepareData.R
inst/tests/result0/10_datasets_processed_by_RMA_before_tidy.csv
inst/tests/result0/11_datasets_processed_by_RMA_after_tidy.csv
inst/tests/result0/11_datasets_processed_by_RMA_before_tidy.csv
inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE10072.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE17475.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE19188.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE27716.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE28571.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE31210.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE37745.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE43580.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE50081.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE68465.pdf inst/tests/result0/comparePreprocessMethod_bet_RMAandGEO_of_GSE7670.pdf inst/tests/result0/histogram_of_10_datasets_processed_by_RMA_before_batch_removed.pdf inst/tests/result0/histogram_of_11_datasets_processed_by_RMA_before_batch_removed.pdf inst/tests/step0-setup-global-setting.R inst/tests/step1-preprocess-raw-data.R inst/tests/step2-combine-expression-and-PhenoData.R inst/tests/step3-integrate-multiple-datasets.R inst/tests/test.iProfile.R inst/tests/test_function.R man/ArrayBuildfData.Rd man/ArrayMerge.Rd man/affyPreprocess.affy.Rd man/affyPreprocess.oligo.Rd man/apply_decode.Rd man/construct_PhenoData.Rd man/create_Exprset.Rd man/decodeLables.Rd man/exists_Separator.Rd man/hugo.Rd man/iProfile-package.Rd man/platformMap.Rd man/update_refData.Rd
ShixiangWang/iProfile documentation built on May 11, 2019, 6:25 p.m.