| calculateMeanValues | Calculate the mean intensity for each trace and return it in... |
| convertOneWiffFolder | Call proteowizard msconvert to extract the data |
| fakeProgress | Fake progress |
| fiaR6 | the FIA R6 object |
| findPotentialWiffDirs | Find wiff directories that may contain SS batches |
| getFIAApp | Get the FIA MS SS app |
| getSettingsApp | get the shiny app for the settings |
| getStartTimeStamp | Get Start Time Stamp from an mzML file A quick way to get... |
| initFiaR6 | initialize the fiaR6 object |
| loadFiaResults | Load the FIA results |
| parseDups | parse out diplicates from a tibble |
| parseFilenames | Split a file name by '.' or '_' or '-' |
| prepForFIA | Prepare for FIA SS data exploration |
| processOneFolder | Process one mzML folder |
| processOneMZML | Process one mzML file |
| readOneFolder | Read results from a folder containing data files from one... |
| reloadFiaResults | reload the fia results from the working directory |
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