Files in Skomim/COVID_trajectory_Madison
Used to calculate sub-state metrics relating to the COVID-19 pandemic
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/count_metrics.R
R/data_pull_fcns.R
R/data_pull_fcns_SG.R
R/datasets.R
R/globals.R
R/to-be-deprecated.R
R/utils.R
README.md
data-raw/cli_sim.R
data-raw/county_data.R
data-raw/hosp_sim.R
data-raw/ili_sim.R
data-raw/wi_dph_regions.csv
data/county_data.rda
data/hosp_sim.rda
inst/file_for_vignette/OHI_BBB_Surveillance_CaseMetric_20200617.xlsx
inst/tinytest/test_count_metrics.R
inst/tinytest/test_utils.R
man/OLD_process_confirmed_cases.Rd
man/calc_num_tests.Rd
man/calc_pos_neg.Rd
man/check_nonneg.Rd
man/class_burden.Rd
man/class_trajectory.Rd
man/clean_cli.Rd
man/clean_histTable.Rd
man/clean_hospital.Rd
man/clean_ili.Rd
man/clean_reversals.Rd
man/clean_testing.Rd
man/clean_total_ed.Rd
man/confirmed_case_composite.Rd
man/county_data.Rd
man/essence_data.Rd
man/essence_query.Rd
man/fdr_trajectory.Rd
man/fill_dates.Rd
man/hosp_sim.Rd
man/merge_metric_files.Rd
man/process_cli.Rd
man/process_confirmed_cases.Rd
man/process_hospital.Rd
man/process_ili.Rd
man/process_testing.Rd
man/process_total_ed.Rd
man/pull_essence.Rd
man/pull_histTable.Rd
man/pull_hospital.Rd
man/pull_testing.Rd
man/pull_wedss.Rd
man/pval_trajectory.Rd
man/rev_cusum_lcl.Rd
man/rev_cusum_ucl.Rd
man/rolling_week.Rd
man/score_burden.Rd
man/score_trajectory.Rd
man/shape_case_data.Rd
man/shape_cli_data.Rd
man/shape_hospital_data.Rd
man/shape_ili_data.Rd
man/shape_testing_data.Rd
man/shape_total_ed_data.Rd
ohiCovidMetrics.Rproj
tests/tinytest.R
vignettes/.gitignore
vignettes/producing-cli-metrics.Rmd
vignettes/producing-confirmed-case-metrics.Rmd
