process_confirmed_cases: Process the shaped confirmed case data.frame into a Tableau...
In Skomim/COVID_trajectory_Madison: Used to calculate sub-state metrics relating to the COVID-19 pandemic

Description Usage Arguments Value Examples

View source: R/count_metrics.R

Process the shaped confirmed case data.frame into a Tableau ready format

1	process_confirmed_cases(case_df)

case_df

Confirmed case data.frame (e.g. produced by pull_histTable)

a Tableau ready data.frame with the following columns:

Date: Date cases were confirmed
Region_ID: ID code for geographic unit (FIPS for county and state)
Region: Name of geographic unit (county, state, HERC region)
RowType: Are row values summary or daily values
Conf_Case_Count: Count of confirmed cases for period
Conf_Case_Burden: see score_burden
Conf_Case_Trajectory: see score_trajectory
Conf_Case_Burden_Class: see class_burden
Conf_Case_Trajectory_Class: see class_trajectory
Conv_Case_Composite_Class: see confirmed_case_composite
Conf_Case_Trajectory_P: see pval_trajectory
Conf_Case_Trajectory_FDR: see fdr_trajectory

library(dplyr)

output <- pull_histTable() %>%
  shape_case_data() %>%
  process_confirmed_cases()

Skomim/COVID_trajectory_Madison documentation built on July 19, 2020, 12:34 a.m.

Skomim/COVID_trajectory_Madison index

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