Man pages for SrivastavaLab/bwgtools
Access data from the bromeliad working group
| bromeliad.ibuttons_read | Read in the bromeliad.ibuttons tab |
| bromeliad.physical_read | Read in the bromeliad.physical tab |
| bromeliad.terrestrial_read | Read in the bromeliad.terrestrial tab |
| brom_id_maker | Make id column |
| bwgtools | bwgtools: A package for the bromeliad working group: the... |
| combine_tab | Obtain data for all sites |
| decomp_responses | Species decomp and total decomp |
| fill_in_argentina | Fill in argentina data |
| filter_centre_leaf | Filter out the centre leaf |
| filter_long_water | Filter water data (long format) |
| filter_naonly_groups | Filter out any groups where depth is all NA |
| find_site_brom | Are the columns site and bromeliad.id found in this... |
| get_all_sites | Get all that data |
| get_bwg_names | obtain the full name data from github |
| get_decomp | Calculate decomposition rates for all sites |
| group_or_summarize | Group or summarize water data (long form) |
| hydro_variables | Calculate the hydrological variables |
| invert_to_long | Tidy wide invert data into long format |
| leaf_loss_mean | Calculate average decomposition for each species |
| leaf_loss_sample | calculate loss for each sample |
| leaf.waterdepths_read | Read in the leaf.waterdepths tab |
| longwater | make the water data long |
| make_default_path | Make default dropbox path |
| make_full_timeline | fill in the missing timeline |
| make_matrix | Create a matrix from a data.frame |
| make_rlq | Create matrices for RLQ analysis |
| make_support_file | Make the support file |
| merge_func | Merge functional groups to invert data |
| names_all_same | Check that names are all identical |
| neutral_read | read in a neutral file |
| offline | Get a file while offline |
| physical_long | Make physical data long |
| read_sheet | Read an excel file from dropbox account |
| read_site_sheet | read in a sheet from all sites |
| site.info_read | Read in the site.info tab |
| site.weather_read | Read in the site.info tab |
| sum_func_groups | summarize functional groups |
| sum_trophic | Summarize functional groups still farther into trophic ranks |
| terrestrial.taxa_read | Read in the terrestrial.taxa tab |
| water_summary_calc | Calculate water depth measurements |
| which_names_doubled | Find and edit duplicate names in dataset |
