GenBin: Simulated genetic data with a binary phenotypes

In SteffenMoritz/ridge: Ridge Regression with Automatic Selection of the Penalty Parameter

Simulated genetic data with a binary phenotypes

Description

Simulated genetic data at 15 SNPs, together with simulated binary phenotypes

Usage

data(GenBin)

Format

GenBin is a saved R matrix with 500 rows and 15 columns. The first column is the pheotypes and columns 2-15 contain the genotypes. Each row represents an indiviaul. The same data are stored in flat text files in GenBin_genotypes and GenBin_phenotypes (in the directory extdata (in the installed package) or inst/extdata (in the source)).

Source

Simulated using FREGENE

References

Fregene: Simulation of realistic sequence-level data in populations and ascertained samples Chadeau-Hyam, M. et al, 2008, BMC Bioinformatics 9:364

Examples

data(GenBin)

SteffenMoritz/ridge documentation built on April 17, 2022, 3:14 a.m.