GRanges_tidiers: Tidying methods for GRanges and GRangesList objects.
In StoreyLab/biobroom: Turn Bioconductor objects into tidy data frames

Description Usage Arguments Value Examples

Tidying methods for GRanges and GRangesList objects.

## S3 method for class 'GRanges'
tidy(x, ...)

## S3 method for class 'GRangesList'
tidy(x, ...)

## S3 method for class 'GRanges'
glance(x, ...)

## S3 method for class 'GRangesList'
glance(x, ...)

`x`	GRanges or GRangesList object
`...`	Not used.

All tidying methods return a data.frame without rownames. tidy returns one row for each range, which contains

start of the range
end of the range
width (or length) of the range
names of the range
strand
seqname Name of the sequence from which the range comes (usually the chromosome)
metadata Any included metadata, (ie, score, GC content)

For GRangesList, there will also be a column representing which group the ranges comes from. glance returns a data.frame with the number of ranges, the number of sequences, and the number of groups (if applicable).

if (require("GenomicRanges", "airway")) {
data(airway)

# GRangesList object
air_gr <- rowRanges(airway)

tidy(air_gr)
glance(air_gr)

# GRanges object
air_gr <- rowRanges(airway)@unlistData

tidy(air_gr)
glance(air_gr)


}