API for StoreyLab/lfa
Logistic Factor Analysis for Categorical Data
| Global functions | |
|---|---|
| .af_cap | Source code |
| .check_geno | Source code |
| .compute_nulls | Source code |
| .convtests | Source code |
| .covar_BEDMatrix | Source code |
| .covar_basic | Source code |
| .covar_logit_BEDMatrix | Source code |
| .covar_logit_basic | Source code |
| .gof_stat | Source code |
| .gof_stat_snp | Source code |
| .lfa_BEDMatrix | Source code |
| .lfa_matrix | Source code |
| .lreg | Source code |
| .new_col_ortho_unit | Source code |
| .norm | Source code |
| .orthog | Source code |
| .pca_af_BEDMatrix | Source code |
| .pvals_empir | Source code |
| .pvals_empir_brute | Source code |
| .tped_line | Source code |
| .trunc_svd_iter | Source code |
| af | Man page Source code |
| af_snp | Man page Source code |
| binary.genotype.map | Source code |
| center | Man page Source code |
| center-deprecated | Man page |
| centerscale | Man page Source code |
| hgdp_subset | Man page |
| lfa | Man page Source code |
| lfa-deprecated | Man page |
| model.gof | Man page Source code |
| model.gof-deprecated | Man page |
| pca_af | Man page Source code |
| read.bed | Man page Source code |
| read.bed-deprecated | Man page |
| read.tped.recode | Man page Source code |
| read.tped.recode-deprecated | Man page |
| sHWE | Man page Source code |
| trunc_svd | Man page Source code |
