Files in StoreyLab/lfa
Logistic Factor Analysis for Categorical Data
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/af.R
R/af_cap.R
R/af_snp.R
R/center.R
R/centerscale.R
R/check_geno.R
R/compute_nulls.R
R/convtests.R
R/covar_BEDMatrix.R
R/covar_basic.R
R/covar_logit_BEDMatrix.R
R/covar_logit_basic.R
R/data.R
R/gof_stat.R
R/gof_stat_snp.R
R/lfa-deprecated.R
R/lfa.R
R/lfa_BEDMatrix.R
R/lfa_matrix.R
R/lreg.R
R/model.gof.R
R/pca_af.R
R/pca_af_BEDMatrix.R
R/pvals_empir.R
R/pvals_empir_brute.R
R/read.bed.R
R/read.tped.recode.R
R/sHWE.R
R/trunc_svd.R
README.md
data/hgdp_subset.rda
inst/CITATION
man/af.Rd
man/af_snp.Rd
man/center-deprecated.Rd
man/centerscale.Rd
man/hgdp_subset.Rd
man/lfa-deprecated.Rd
man/lfa.Rd
man/model.gof-deprecated.Rd
man/pca_af.Rd
man/read.bed-deprecated.Rd
man/read.tped.recode-deprecated.Rd
man/sHWE.Rd
man/trunc_svd.Rd
src/.gitignore
src/Makevars
src/fastmat.c
src/lfa-init.c
src/lfa.c
src/lfa.h
src/lreg.c
tests/testthat.R
tests/testthat/test-lfa.R
vignettes/lfa.Rnw
vignettes/lfa.bib
