R/bottomly.R

In StoreyLab/superSeq: Determining sufficient read depth in RNA-Seq experiments

#' @name bottomly
#' 
#' @title RNA-Seq counts from Bottomly et al 2011
#' 
#' @docType data
#' 
#' @description An expressionSet object of the Bottomly et al study.
#' 
#' This was downloaded from the ReCount database of analysis-ready RNA-Seq datasets (Frazee et al 2011).
#' 
#' Bottomly D, Walter NA, Hunter JE, et al. Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum
#'  using RNA-Seq and microarrays. PLoS One. 2011;6(3):e17820. Published 2011 Mar 24. doi:10.1371/journal.pone.0017820
#' 
#' Frazee, A. C., Langmead, B., and Leek, J. T. (2011). ReCount: a multi-experiment resource of analysis-ready
#' RNA-seq gene count datasets. BMC Bioinformatics, 12, 449.
#' http://bowtie-bio.sourceforge.net/recount/
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