Files in Sun-lab/CARseq
Cell type-specific differential analysis of count data
.Rbuildignore
.gitignore
CARseq.Rproj
DESCRIPTION
NAMESPACE
R/data.R
R/estimate_shrinkage_prior.R
R/loglik.R
R/utils.R
README.md
data/n50DE221rep1.RData
inst/docs/Jin_et_al.-2021-Cell-type-aware_analysis_of_RNA-seq_data.pdf
man/CARseq-package.Rd
man/barplot_3d.Rd
man/estimate_shrinkage_prior.Rd
man/estimate_variance_parameter.Rd
man/fit_model.Rd
man/get_qvalues_one_inflated.Rd
man/grad_negloglik.Rd
man/n50DE221rep1.Rd
man/negloglik.Rd
man/negloglik_adjusted_profile.Rd
man/permute_case_and_controls.Rd
man/run_CARseq.Rd
tests/testthat.R
tests/testthat.R.Rcheck/00check.log
tests/testthat/test-loglik.R
