Ensemble Penalized Cox Regression for Survival Prediction

bootstrapRegCoefs | Bootstrapped testing of regression coefficients in a... |

conforminput | Conform the dimensions of a new input data matrix to a... |

cv | Function that creates customized cross-validation folds |

cv.alpha | Cross-validation runs for risk predition at a single value of... |

cv.grid | Cross-validation runs for risk predition for a grid of... |

DREAM | FIMM-UTU DREAM winning implementation of an ensemble of... |

ePCR | Ensemble Penalized Cox Regression Modeling for Overall... |

heatcv | Plot a heatmap of the prediction performance statistic as a... |

integrateRegCurve | Integrate the area over/under the regularization path of a... |

interact.all | Compute all pairwise interactions between the columns of a... |

interact.part | Compute a chosen set of pairwise interactions between two... |

meanrank | Compute mean of predicted risk ranks for an ePCR ensemble |

NelsonAalen | Cox-Oakes extension of the Nelson-Aalen estimates for a Cox... |

normriskrank | Normalize ensemble risk scores to ranks and then to uniform... |

PEP-class | Penalized Ensemble Predictor (PEP) S4-class ensemble... |

PEP-methods | PEP-methods |

PSP-class | Penalized Single Predictor (PSP) S4-class as a member of... |

PSP-methods | PSP-methods |

score.cindex | Scoring function for evaluating survival prediction through... |

score.iAUC | Scoring function for evaluating survival prediction by... |

TimeSurvProb | Predict cumulative survival probabilities for new data at... |

TYKS | ePCR model fitted to the Turku University Hospital cohorts... |

TYKS_reduced | ePCR model fitted to the Turku University Hospital cohorts... |

TYKSSIMU | TYKSSIMU - simulated data matrices and survival responses... |

zt | Extended function for z-transformation, filling non-finite... |

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.