update.gpa.pca
: a for adding specimens correctly to a PCA.prop.part.names
: a function for getting names of species within clades (with inc.nodes
option).rarefy.stat
: a function for rarefying statistics.slope.diff
: a function for measuring slope differences. procrustes.var.plot
: col.range
now allows to attribute a range for the color gradient, allowing the color gradients to be absolute (previously they were only relative to the input data - suggest by Pietro Viacava).coordinates.difference
now has a rounding
tolerance argument for rounding values (suggested by Ellen Coombs). Also, the function can not produce infinite angles anymore (NaN
are replaced by 0
).variation.range
can now take an "array"
as the procrustes
argument."mshape"
objects are now automatically coerced as "matrix"
in coordinates.difference
.lwd
argument to procrustes.var.plot
(suggested by Pietro Viacava)linear.dist
function to measure linear distances between pairs of landmarks.array.to
utility function for converting gpagen
arrays to lists or matrices.variation.range
when using ordination = TRUE
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