selectHKwrapper: A wrapper for the selectHKs function

In TJGorrie/miRoar: qPCRExperiment

A wrapper for the selectHKs function

Description

A wrapper to calculate the geometric mean from HK genes selected by genorm or normfinder algorithms

Usage

selectHKwrapper(
  x,
  method = c("geNorm", "NormFinder"),
  minNrHKs = 2,
  group = NULL,
  trace = T,
  na.rm = T,
  log = T
)

Arguments

x	ct Values
method	character, which method to use, either genorm or normfinder
minNrHKs	Numeric, number of miRs
group	factor, group variable for normFinder
trace	IF messages are to be produced
na.rm	if na values should be removed
log	if values are in log space

Value

the factor to be substract from CT values

Author(s)

Tyler Gorrie-Stone [e-mail]

See Also

deltaCT

TJGorrie/miRoar documentation built on April 10, 2024, 4:28 p.m.