API for TS404/AlikeAlignmentAligner
Comparison of Alternative Multiple Sequence Alignments

Global functions
AlignStat Man page
PS Source code
SP Source code
SPprep Source code
compare_alignments Man page Source code
comparison_alignment Man page
degap_alignment Source code
import_alignment Source code
list_pairs Source code
percent Source code
plot_SP_summary Man page Source code
plot_dissimilarity_matrix Man page Source code
plot_dissimilarity_summary Man page Source code
plot_similarity_heatmap Man page Source code
plot_similarity_summary Man page Source code
prepare_alignment_matrix Source code
rcpp_align Source code
rcpp_prepare_alignment_matrix Source code
reference_alignment Man page
valid_alignments Source code
TS404/AlikeAlignmentAligner documentation built on Oct. 13, 2021, 4:13 p.m.