calculateAverageSpectra: Calculate Average Spectra of Clicks
In TaikiSan21/PAMr: Load and Process Passive Acoustic Data

Description Usage Arguments Value Author(s)

View source: R/calculateAverageSpectra.R

Calculates the average spectra of all the clicks present in an event

calculateAverageSpectra(
  x,
  evNum = 1,
  calibration = NULL,
  wl = 4096,
  sr = NULL,
  plot = TRUE
)

`x`	an AcousticEvent or AcousticStudy object
`evNum`	if `x` is a study, the event number to calculate the average spectra for
`calibration`	a calibration function to apply, if desired
`wl`	the size of the click clips to use for calculating the spectra. If greater than the clip present in the binary, clip will be zero padded
`sr`	a sample rate to use if the sample rate present in the database needs to be overridden (typically only needed if a decimator was used)
`plot`	logical flag whether or not to plot the result. The plot will be a two panel plot, the top is a concatenated spectrogram where the y-axis is frequency and the x-axis is click number. The bottom plot is the average spectrogram of all clicks, the y-axis is normalized magnitude (dB values for each click are normalized between 0 and 1 before averaging), x-axis is frequency.

invisibly returns a list with three items: freq, the frequency, average, the average spectra of the event, and all, the individual spectra of each click in the event as a matrix.

Taiki Sakai taiki.sakai@noaa.gov

TaikiSan21/PAMr documentation built on Nov. 15, 2020, 9:46 p.m.