plotDist.matrix: Plot distance matrix with clusters

In TankredO/ckmeans: consensus K-means clustering

Description

Plots a distance matrix with color coded clusters

Usage

## S3 method for class 'matrix'
plotDist(
  x,
  cl = NULL,
  value_range = NULL,
  ord = TRUE,
  col = NULL,
  col_cl = NULL,
  plot_colorbar = FALSE,
  ...
)

Arguments

x	n*n (distance) matrix
cl	vector determining cluster membership
value_range	vector with two elements c(d_min, d_max) determining the possible value range within the matrix. By default this will be the range of values in x.
ord	vectors of indices for ordering of the matrix or boolean determining whether the matrix should be ordered
col	vector of colors for the distance matrix
col_cl	vector of colors or color ramp function for the clusters
plot_colorbar	logical determining whether a color bar should be plotted
...	further arguments

Details

Function to plot a distance matrix

Author(s)

Tankred Ott

TankredO/ckmeans documentation built on April 5, 2020, 12:59 a.m.