R/dev.R

# Set up package -----------------------------------
#usethis::use_git()
#usethis::use_github()
#usethis::create_github_token()
#usethis::use_mit_license()

##Bioconductor -----------------------------------
# usethis::use_package("edgeR")
# usethis::use_package("limma", type = "Suggests")
# usethis::use_package("apcluster", type = "Suggests")
# usethis::use_package("roxygen2"); usethis::use_pipe(export = TRUE)
# usethis::use_package("rlang")
# usethis::use_package("org.At.tair.db", type = "Suggests")
# usethis::use_package("AnnotationDbi", type = "Suggests")
# usethis::use_package("ComplexHeatmap", type = "Suggests")
# usethis::use_package("apcluster", type = "Suggests")


##Tidyverse -----------------------------------
# usethis::use_package("ggplot2", type = "Suggests")
# usethis::use_package("dplyr", type = "Suggests")
# usethis::use_package("purrr", type = "Suggests")
# usethis::use_package("tibble", type = "Suggests")
# usethis::use_package("tidyr", type = "Suggests")


# gene_count_matrix <- utils::read.csv("/Users/TedCCLeung/Documents/Projects/Packages/gene_count_matrix.csv")
# transcript_count_matrix <- utils::read.csv("/Users/TedCCLeung/Documents/Projects/Packages/transcript_count_matrix.csv")

# usethis::use_data(gene_count_matrix)
# usethis::use_data(transcript_count_matrix)
TedCCLeung/CFH1 documentation built on May 13, 2022, 8:09 p.m.