MIPS1:

# Set up package -----------------------------------
#usethis::use_git()
#usethis::use_github()
#usethis::create_github_token()
#usethis::use_mit_license()

# Data manipulation -----------------------------------
# usethis::use_package("utils")
# usethis::use_package("stats")
# usethis::use_package("grDevices")
# usethis::use_package("rlang")
# usethis::use_package("extrafont")

# Bioconductor -----------------------------------
# usethis::use_package("BiocGenerics", min_version = "0.40.0")
# usethis::use_package("GenomeInfoDb", min_version = "1.30.0")
# usethis::use_package("universalmotif", min_version = "1.11.1")
# usethis::use_package("ComplexHeatmap", min_version = "2.0.0")
# usethis::use_package("GenomicRanges", min_version = "1.46.1")
# usethis::use_package("GenomicFeatures", min_version = "1.46.1")
# usethis::use_package("AnnotationDbi", min_version = "1.40.2")
# usethis::use_package("BSgenome.Athaliana.TAIR.TAIR9", min_version = "1.3.1000")
# usethis::use_package("rtracklayer")
# usethis::use_package("cowplot")
# usethis::use_package("Biostrings")
# usethis::use_package("BSgenome.Athaliana.TAIR.TAIR9")

##Tidyverse -----------------------------------

# usethis::use_package("stringr", min_version = "1.4.0", type = "Suggests")
# usethis::use_package("magrittr", min_version = "2.0.1", type = "Suggests")
# usethis::use_package("dplyr", min_version = "1.0.7", type = "Suggests")
# usethis::use_package("tidyr", min_version = "1.1.4", type = "Suggests")
# usethis::use_package("purrr", min_version = "0.3.4", type = "Suggests")
# usethis::use_package("readr", min_version = "2.1.1", type = "Suggests")
# usethis::use_package("forcats", min_version = "0.5.1", type = "Suggests")
# usethis::use_package("tibble", min_version = "3.1.6", type = "Suggests")
# usethis::use_package("ggplot2", min_version = "3.3.5", type = "Suggests")
# usethis::use_package("roxygen2"); usethis::use_pipe(export = TRUE)
# usethis::use_package("ggpubr", type = "Suggests")


# Set up NAMESPACE and install -----------------------------------
# devtools::document()
# devtools::load_all()
# devtools::check()
# devtools::install()

# For checking packages needed -----------------------------------

#RawWeightData <- utils::read.csv("/Users/TedCCLeung/Documents/Lab/People/QingQing/PhotonUsage/weight.csv", header = TRUE)
#usethis::use_data(RawWeightData, overwrite = TRUE)

#GrowthRateData <- GetGrowthRate()
#usethis::use_data(GrowthRateData, overwrite = TRUE)