motif_to_CISBP_family: Search which family the most motif belongs to in CISBP
In TedCCLeung/MotifAnalysis: What the Package Does (One Line, Title Case)
View source: R/motif_to_CISBP_family.R
motif_to_CISBP_family R Documentation
Search which family the most motif belongs to in CISBP
Description
Search which family the most motif belongs to in CISBP
Usage
motif_to_CISBP_family(
motifs,
similarity_cutoff = 0.5,
only_CISBP_motifs = FALSE
)
Arguments
motifs
Universalmotif objects
similarity_cutoff
Pearson's similarity cutoff for determining if a motif has a counterpart in CISBP
only_CISBP_motifs
Whether the input consists of only motifs from CISBP and comparison is unnecessary
Value
Character
TedCCLeung/MotifAnalysis documentation built on May 3, 2022, 2:11 p.m.
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View source: R/motif_to_CISBP_family.R
| motif_to_CISBP_family | R Documentation |
Search which family the most motif belongs to in CISBP
Description
Search which family the most motif belongs to in CISBP
Usage
motif_to_CISBP_family( motifs, similarity_cutoff = 0.5, only_CISBP_motifs = FALSE )
Arguments
motifs |
Universalmotif objects |
similarity_cutoff |
Pearson's similarity cutoff for determining if a motif has a counterpart in CISBP |
only_CISBP_motifs |
Whether the input consists of only motifs from CISBP and comparison is unnecessary |
Value
Character
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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