Man pages for TedCCLeung/PhCluster
| clock_genes | Gene names for clock genes |
| clustering_heatmap_dynamic | Plot heat map of clustering of expression value |
| clustering_heatmap_hybrid | Plot heat map of clustering of expression value |
| clustering_heatmap_static | Plot heat map of clustering of expression value |
| dend_get_merge_height | Function to get the merge height of a vector of labels in a... |
| expression_data | Retrieve TMM expression data of genes |
| gene_identifiers | Gene names for the matrix expression_matrix_photoperiodic |
| get_TAIR | Function to generate a TxDb object from the GenomicFeatures... |
| photoperiodic_genes | Photoperiodic genes in this dataset |
| pipe | Pipe operator |
| plot_gene | Extract significantly up- and down-reguluted genes from edgeR... |
| process_aggcluster_dynamic | Function to |
| process_aggcluster_static | Function to |
| rDEI_summary | Information on daily expression integral. |
| TMM_mean_matrix | Expression of genes in mean TMM calculated by edgeR |
