expression_data: Retrieve TMM expression data of genes

In TedCCLeung/PhCluster:

Retrieve TMM expression data of genes

Description

Retrieve TMM expression data of genes

Usage

expression_data(threshold = 1, photoperiodic_only = FALSE, condition_count = 3)

Arguments

threshold	Filter by expression level. (Sum of TMM reads in each of the three photoperiods)
photoperiodic_only	Whether to include only genes that show differential expression between photoperiods
condition_count	1, 2 or 3, the number of photoperiods that needs to be detected above threshold

Value

List of matrices

TedCCLeung/PhCluster documentation built on Aug. 5, 2022, 5:20 a.m.