Description Usage Arguments Details Value
Plots PCA of all features. Colors high and low quality cells based on outlier detection.
1 |
features |
Input dataset containing features (cell x features) |
annot |
Matrix annotation of each cell |
pca |
PCA of features |
col |
color code indicating what color high and what low quality cells |
output_file |
where plot is stored |
This function plots PCA of all features + most informative features
Plots of PCA
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