API for TheJacksonLaboratory/sRACIPE_dev
Systems biology tool to simulate gene regulatory circuits
| Global functions | |
|---|---|
| ClustFunction | Source code |
| ModelPvalue | Man page Source code |
| NthMin | Man page Source code |
| PermutedVar | Man page Source code |
| SimulatedPValueAbs | Man page Source code |
| SimulatedVarPValue | Man page Source code |
| calcHeatmapSimilarity | Man page Source code |
| densityPlot | Man page Source code |
| density_plot | Man page Source code |
| genParamNames | Man page Source code |
| generateThresholds | Source code |
| hello | Man page |
| knockdownAnalysis | Man page Source code |
| loadCircuit | Man page Source code |
| loadConfig | Man page Source code |
| load_data | Man page Source code |
| normalizeGE | Man page Source code |
| overExprAnalysis | Man page Source code |
| plotCircuit | Man page Source code |
| plotData | Man page Source code |
| plotParamBifur | Man page Source code |
| plot_data_deterministic | Man page Source code |
| plot_data_knockout_all | Man page Source code |
| plot_data_knockout_single | Man page Source code |
| plot_data_stochastic | Man page Source code |
| plot_network | Man page Source code |
| readTopology | Source code |
| sRACIPE | Man page |
| sRACIPE-package | Man page |
| sRACIPE_load_configuration | Man page Source code |
| sRACIPE_load_topology | Man page Source code |
| sRACIPE_simulate_GRN | Source code |
| simulateGRC | Man page Source code |
| simulateGRCCpp | Source code |
