genomics.df.long: Create a data frame with genomic alterations listed in long...

In TheMillerLab/BodyMapR: BodyMapR

Create a data frame with genomic alterations listed in long format

Description

'genomics.df.long()' wrangles and processes genomics data from a REDCap project that has incorporated the Genomics Instrument. This allows for expedited analysis of patient-level data from REDCap. Genetic alterations are listed in long format.

Usage

genomics.df.long(data)

Arguments

data	tibble or data frame

Value

A tibble containing record_id, lesion_tag_genomics, genomics_tissue_type, gene, nucleotide, protein, cnv_yn with the gene arranged in long format

Examples

# Create a new DF with sample data set
BodyMap::mock_mcc_dataset %>%
  genomics.df.long()

TheMillerLab/BodyMapR documentation built on April 4, 2022, 5:10 a.m.