plot_comm_bubbles: Plot population densities and trait distribution over time,...

In TheoPannetier/comrad: R implementation of a Competitive Radiation model

Plot population densities and trait distribution over time, with bubbles

Description

Produces a plot of trait evolution where individuals are binned as bubbles which colour indicate the species identity and the size the number of individuals in the bin. Plots both species identity and individual densities, but at the expense of resolution (compared to plot_comm_trait_evolution()).

Usage

plot_comm_bubbles(
  comrad_tbl,
  generation_range = c(0, Inf),
  xlim = NULL,
  ylim = NULL
)

Arguments

comrad_tbl	a tibble containing the output of a comrad simulation, as produced by run_simulation().
generation_range	numeric vector with length 2, supplying the first and last generation to plot from the dataset. Defaults to every generation in the table
xlim	numeric vector, the range of x-values, passed to ggplot::coord_cartesian() if not NULL.
ylim	numeric vector, the range of y-values, passed to ggplot::coord_cartesian() if not NULL.

Author(s)

Théo Pannetier

TheoPannetier/comrad documentation built on April 8, 2023, 8:06 a.m.