plot_zt: Plot trait distribution through time
In TheoPannetier/comsie: R implementation of a Competitive Radiation model

plot_zt

R Documentation

Plot trait distribution through time

Description

A forked version of the of comrad::plot_comm_traits_evolution(). The main difference is the (faster) use of rectangles instead of hexes to represent occupied areas of the trait distribution, and more straightforwards plotting options.

Usage

plot_zt(
  comsie_tbl,
  fill_by = "clade",
  xlim = c(0, max(comsie_tbl$t)),
  ylim = c(-7.5, 7.5),
  binwidths = c(100, 0.01),
  alpha = 1
)

Arguments

`comsie_tbl`	a tibble, e.g. output of `read_comsie_tbl()`
`fill_by`	How should rectangles be coloured? either "species" or "clade".
`xlim`	length 2 num vector to pass to ggplot's `coord_cartesian()`
`ylim`	length 2 num vector to pass to ggplot's `coord_cartesian()`
`binwidths`	length 2 num vector, horizontal and vertical widths of the rectangles.
`alpha`	the ggplot parameter