complete_logbook_entries: Complete logbook entries after job completion
In TheoPannetier/hamr: Utility package for comrad

View source: R/complete_logbook_entries.R

complete_logbook_entries

R Documentation

Complete logbook entries after job completion

Description

'status' and 'runtime' entries can be written only after a job has completed (or failed). This function download the logbook from Peregrine, writes the entries for 'job_ids', and uploads back to Peregrine. EDIT 1.7.0. also updates the logbook with the size of the 'sim' '.csv' file, and summary information about the state of the community at the last step.

Usage

complete_logbook_entries(
  job_ids,
  pkg = "comrad",
  which_one = "sims",
  vars = c("status", "runtime", "csv_size", "last_gen")
)

Arguments

`job_ids`	eight-digit job IDs given by Peregrine upon submission.
`which_one`	character, which logbook? can be '"sims"' or '"dd_ml_without_fossil"'
`vars`	character vector, name of variables to update. Can be 'status', 'runtime', 'csv_size', and/or 'last_gen' (defaults to all).