SNP selection based on PCA contributions and summarization of nearby correlated SNPs by estimating haplotypes using the SHAPEIT software, in order to perform genome wide unsupervised clustering and enhance non-ancestry signals. Developed to study systemic autoimmune diseases in the IMI PRECISESADS project.
Package details |
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Maintainer | |
License | GPL-3 | file LICENSE |
Version | 0.3 |
Package repository | View on GitHub |
Installation |
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