TiphaineCMartin/coMET_original
coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns.

Package index
Search the TiphaineCMartin/coMET_original package
Vignettes
Functions
206
Source code
13
Man pages
104
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TiphaineCMartin/coMET_original: coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns.
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API

API for TiphaineCMartin/coMET_original
coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns.

Global functions
BindingMotifAll Man page
BindingMotifMultiple Man page
BindingMotifSingle Man page
COSMICTrack Man page
COSMIC_UCSC Man page
ChIPTF_ENCODE Man page
ClinVarCnvTrack Man page
ClinVarCnv_UCSC Man page
ClinVarMain_UCSC Man page
CoreillCNVTrack Man page
CoreillCNV_UCSC Man page
DNAse_UCSC Man page
DNaseI_FANTOM Man page
DNaseI_RoadMap Man page
DNaseI_RoadMapSingle Man page
DupTrack Man page
GAD_UCSC Man page
GWAScatalog_UCSC Man page
GeneReviews_UCSC Man page
HiCdata2matrix Man page
HistoneAll_UCSC Man page
HistoneOne_UCSC Man page
ISCA_UCSC Man page
OtherRegulatoryRegions Man page
OtherRegulatoryRegionsTrackAll Man page
OtherRegulatoryRegionsTrackSingle Man page
PancreasIG Man page
PancreasIGtrack Man page
PancreasimprintedIG Man page
PancreasimprintedIGtrack Man page
RegulatoryEvidenceBiomartTrackAll Man page
RegulatoryEvidenceBiomartTrackMultiple Man page
RegulatoryEvidenceBiomartTrackSingle Man page
RegulatoryFeaturesBiomart Man page
RegulatoryFeaturesBiomartTrackAll Man page
RegulatoryFeaturesBiomartTrackMultiple Man page
RegulatoryFeaturesBiomartTrackSingle Man page
RegulatorySegmentsBiomart Man page
RegulatorySegmentsBiomartTrackAll Man page
RegulatorySegmentsBiomartTrackMultiple Man page
RegulatorySegmentsBiomartTrackSingle Man page
SegmentalDupsUCSC Man page
StomachIG Man page
StomachIGtrack Man page
TFBS_FANTOM Man page
allIG Man page
allIGtrack Man page
allimprintedIG Man page
allimprintedIGtrack Man page
bindMotifsBiomartTrackAll Man page
bindMotifsBiomartTrackDouble Man page
bindMotifsBiomartTrackMultiple Man page
bindMotifsBiomartTrackSingle Man page
bindingMotifsBiomart_ENSEMBL Man page
check.configVar Man page
check.configVarcometlist Man page
check.format.mydata Man page
chipTFtrack Man page
chrUCSC2ENSEMBL Man page
chromHMM_RoadMap Man page
chromHMM_RoadMapAll Man page
chromHMM_RoadMapAllE063 Man page
chromHMM_RoadMapMultiple Man page
chromHMM_RoadMapSingle Man page
chromatinHMMAll Man page
chromatinHMMAll_UCSC Man page
chromatinHMMOne_UCSC Man page
chromatinHMMRoadMap Man page
chromatinHMMRoadMapAll Man page
chromatinHMMRoadMapMultiple Man page
chromatinHMMRoadMapSingle Man page
chromhmmNoPattern Man page
chromhmmPattern Man page
chromhmmtrackone Man page
clinCNV Man page
clinVariant Man page
coMET Man page
coMET-package Man page
comet Man page
comet.list Man page
comet.web Man page
compute.cormatrix Man page
coreilVariant Man page
cosmicVariant Man page
cpgIslands_UCSC Man page
cpgIslandtrack Man page
cpgIstrack Man page
cpgPvalue Man page
create.color.bar Man page
create.color.list Man page
create.color.list.large Man page
create.symbol.list Man page
create.symbol.list.large Man page
create.tracks.user Man page
create.tracks.web Man page
createList.trackUser Man page
dgfootprints_RoadMap Man page
dgfootprints_RoadMapSingle Man page
dnasetrack Man page
draw.legend Man page
draw.name.genes.web Man page
draw.name.tracks.web Man page
draw.plot.annotation Man page
draw.plot.axis.data Man page
draw.plot.comet Man page
draw.plot.comet.nopval Man page
draw.plot.comet.web Man page
draw.plot.cormatrix.plot Man page
draw.plot.grid.mydata Man page
draw.plot.grid.mydata.large Man page
draw.plot.grid.mydata.names Man page
draw.plot.grid.setup Man page
draw.plot.linesconnection Man page
draw.plot.mydata.ggbio Man page
dyaRM Man page
dyaRMtrack Man page
eGTexTrackSNP Man page
eGTexTrackall Man page
eQTL Man page
eQTLTrackAll Man page
eQTLTrackMultiple Man page
eQTLTrackSingle Man page
eQTL_GTEx Man page
enhFANTOMtrack Man page
enhRM Man page
enhRMtrack Man page
fix.values Man page
fix.values.generic Man page
fix.values.large Man page
gadtrack Man page
gcContent_UCSC Man page
gctrack Man page
geneNameEnsembl Man page
geneRtrack Man page
genesName_ENSEMBL Man page
genesUcsctrack Man page
genes_ENSEMBL Man page
genetrack Man page
gwastrack Man page
histonalltrack Man page
histoneonetrack Man page
imprintedGenesGTEx Man page
imprintedGenes_GTEx Man page
interestGenes_ENSEMBL Man page
interestTranscript_ENSEMBL Man page
interestgenesENSMBLtrack Man page
interesttransENSMBLtrack Man page
iscatrack Man page
knownGenesUCSC Man page
knownGenes_UCSC Man page
matrix_HiC_Rao Man page
metQTL Man page
metQTLTrackAll Man page
metQTLTrackMultiple Man page
metQTLTrackSingle Man page
miRNATargetRegionsBiomart Man page
miRNATargetRegionsBiomartTrack Man page
miRNATargetRegionsBiomart_ENSEMBL Man page
otherRegulatoryRegionsTrackAll Man page
otherRegulatoryRegionsTrackSingle Man page
otherRegulatoryRegions_ENSEMBL Man page
printPlot.comet Man page
printPlot.comet.nopval Man page
printPlot.comet.web Man page
promRMtrack Man page
promRMtrackE063 Man page
psiGTex Man page
psiGTexTrackSNP Man page
psiGTexTrackall Man page
psiQTL_GTEx Man page
read.config Man page
read.file.cormatrix Man page
read.file.mydata Man page
read.file.mydata.large Man page
refGenes_UCSC Man page
regulationBiomart_ENSEMBL Man page
regulationENSEMBLtrack Man page
regulatoryEvidenceBiomartTrackAll Man page
regulatoryEvidenceBiomartTrackMultiple Man page
regulatoryEvidenceBiomartTrackSingle Man page
regulatoryEvidenceBiomart_ENSEMBL Man page
regulatoryFeaturesBiomartTrackAll Man page
regulatoryFeaturesBiomartTrackMultiple Man page
regulatoryFeaturesBiomartTrackSingle Man page
regulatoryFeaturesBiomart_ENSEMBL Man page
regulatorySegmentsBiomartTrackAll Man page
regulatorySegmentsBiomartTrackMultiple Man page
regulatorySegmentsBiomartTrackSingle Man page
regulatorySegmentsBiomart_ENSEMBL Man page
repeatMaskerTrack Man page
repeatMasker_UCSC Man page
retrieve.data Man page
rmtrack Man page
segmentalDups_UCSC Man page
set.image.parameters Man page
snpBiomart_ENSEMBL Man page
snpLocations_UCSC Man page
snpUCSCtrack Man page
snptrack Man page
structureBiomart_ENSEMBL Man page
strutrack Man page
tfbsFANTOMtrack Man page
transENSMBLtrack Man page
transcript_ENSEMBL Man page
xenogenestrack Man page
xenorefGenes_UCSC Man page
TiphaineCMartin/coMET_original documentation built on May 9, 2019, 4:49 p.m.

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