GenesFromAnatomy: Create a radar graph of anatomical features and their genes

In Tsmnbx/ZooGVT: A Tool for Analyzing Animal Genomes

Description

This function takes a species from BgeeDB and creates a Radar graph that displays the number of genes along with the anatomica features

Usage

GenesFromAnatomy(speciesBgee, speciesCommon, feature)

Arguments

speciesBgee	The Scientific name of a Species found in BgeeDB
speciesCommon	The common name of the same species in Ensemble
feature	The feature, an adjective that describes what we want to find in the anatomical features for and how many genes we have for them

Value

a radar graph that shows the terms and how many genes we find per term

Source

http://bioconductor.org/packages/release/bioc/vignettes/BgeeDB/inst/doc/BgeeDB_Manual.html

Examples

## Not run: 
AnatomyGeneRadarGraph <-GenesFromAnatomy("Danio_rerio","Zebrafish","pectoral fin")

## End(Not run)

Tsmnbx/ZooGVT documentation built on Dec. 18, 2021, 5:14 p.m.