inst/README.md

In UCLouvain-CBIO/scpdata: Single-Cell Proteomics Data Package

Methodology used for collecting the data

1. Identify the data source and the annotations from the article, ask authors for data if needed.
2. Create a new R script that converts the data using the scp framework
3. Add data documentation and the data collection procedure in scpdata/R/data.R
4. Add the dataset information in the make-metadata.R and update the metadata.csv
5. Test the new data set by running ExperimentHubData::makeExperimentHubMetadata("scpdata").
6. Contact Bioc team and upload Rda to Microsoft Azure: [e-mail] Then upload the files using the provided link: azcopy copy --recursive scpdata/ 'https://bioconductorhubs.blob.core.windows.net/staginghub?<sas-url>' or more easily, use the R script. See the help page for more information
7. Compile the documentation with roxygen2 and check package.
8. Update the NEWS.md file and bump package version

UCLouvain-CBIO/scpdata documentation built on Oct. 29, 2024, 4:22 p.m.