R/RcppExports.R

In USCbiostats/LinGxEScanR: Run Linear Regression GWEIS Using VCF or Binary Dosage Files

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

increment <- function(n) {
    .Call(`_LinGxEScanR_increment`, n)
}

initlslinreg <- function(y, xl, xtx, xtxinv0, ql, rtl, k, zt, resids, sigma2, s2, loglike) {
    .Call(`_LinGxEScanR_initlslinreg`, y, xl, xtx, xtxinv0, ql, rtl, k, zt, resids, sigma2, s2, loglike)
}

lslinregfit <- function(dosage, y, xl, xr, bt, bb, ql, qr, rtl, rtr, rbr, h, k, t, zb) {
    .Call(`_LinGxEScanR_lslinregfit`, dosage, y, xl, xr, bt, bb, ql, qr, rtl, rtr, rbr, h, k, t, zb)
}

lslinregresiduals <- function(y, xl, xr, bt, bb, resids) {
    .Call(`_LinGxEScanR_lslinregresiduals`, y, xl, xr, bt, bb, resids)
}

lslinregsigma2 <- function(xl, xr, resids, sigma2, s2, loglike) {
    .Call(`_LinGxEScanR_lslinregsigma2`, xl, xr, resids, sigma2, s2, loglike)
}

lslinregxtx <- function(xl, xr, xtx) {
    .Call(`_LinGxEScanR_lslinregxtx`, xl, xr, xtx)
}

lslinregxtxinv <- function(xtx, xtxinv) {
    .Call(`_LinGxEScanR_lslinregxtxinv`, xtx, xtxinv)
}

lslinreguut <- function(xl, xr, resids, s2a, uut) {
    .Call(`_LinGxEScanR_lslinreguut`, xl, xr, resids, s2a, uut)
}

lslinregwaldtest <- function(xl, xr, bb, s2, xtxinv, std_err, xrs2, chi2) {
    .Call(`_LinGxEScanR_lslinregwaldtest`, xl, xr, bb, s2, xtxinv, std_err, xrs2, chi2)
}

lslinreghwtest <- function(xl, xr, resids, xtxinv, s2a, hws2) {
    .Call(`_LinGxEScanR_lslinreghwtest`, xl, xr, resids, xtxinv, s2a, hws2)
}

lslinreg <- function(dosage, y, xl, xr, xtx, bt, bb, ql, qr, rtl, rtr, rbr, h, k, t, zb, resids, sigma2, s2, hws2, xtxinv, std_err, xrs2, chi2, loglike) {
    .Call(`_LinGxEScanR_lslinreg`, dosage, y, xl, xr, xtx, bt, bb, ql, qr, rtl, rtr, rbr, h, k, t, zb, resids, sigma2, s2, hws2, xtxinv, std_err, xrs2, chi2, loglike)
}

initreg <- function(X, y) {
    .Call(`_LinGxEScanR_initreg`, X, y)
}