get_all_covariates: Table of difference between model 2 and model 4 OFV values...

In UUPharmacometrics/pmutils: R package for pharmacometric utilities

Table of difference between model 2 and model 4 OFV values and number of added parameters. In case of non-missing dofv value of the full omega block, frem dofv value will be calculated as difference between model 2 and model 4 OFV values and dofv value of the full omega block.

Description

Table of difference between model 2 and model 4 OFV values and number of added parameters. In case of non-missing dofv value of the full omega block, frem dofv value will be calculated as difference between model 2 and model 4 OFV values and dofv value of the full omega block.

Usage

get_all_covariates(
  frem_directory,
  nr_cov,
  nr_param,
  dofv_full_block,
  skip = NULL,
  quiet = F
)

Arguments

frem_directory	Frem run directory. Will search for the file raw_results.csv in the subdirectories model2_modelfit_dir1 and model4_modelfit_dir1.
nr_cov	Number of covariates.
nr_param	Numbner of parameters.
dofv_full_block	The dOFV value of the full omega block.
skip	A character vector with names of the skipped parts in the qa run. Will check if "frem" is one of the vector elements. By default skip=NULL.
quiet	A logical indicating whether function should not write the warning message if some file not found. By default quiet=FALSE.

Value

A list of 2 elements: frem_table - a data frame with joint improvement in OFV when taking correlations into account frem_files_exists - logical argument indicating whether needed files exist in the input directory and there is at least one covariate

UUPharmacometrics/pmutils documentation built on Oct. 16, 2024, 9:47 a.m.