summarize_tag: Summarize the features in a gencode-derived tibble.

In UW-GAC/genetable: Functions to Build a Gene Definitions Table in the GAC Database

Description

summarize_tag returns a tibble containing the number of features included in a tibble produced by genetable::import_gencode() (or similar) that are annotated with the tag provided in the argument. Legal tags are listed at https://www.gencodegenes.org/gencode_tags.html

Usage

summarize_tag(gtf, tag = "basic")

Arguments

gtf	A tibble containing gene definitions in the formate made by genetable::import_gencode()
tag	The tag to summarize features by - a string.

Value

A table containing the cross tabulation of features by tag.

Examples

## Not run: 
summarize_tag(gtf = gtf, tag = "basic")

## End(Not run)

UW-GAC/genetable documentation built on May 5, 2019, 11:08 p.m.