KPartiteNetwork-class: k-Partite Network
In VEuPathDB/plot.data: Create `data.table`s of Ready to Plot Data

KPartiteNetwork-class

R Documentation

k-Partite Network

Description

The k-partite network class represents data in the form of a network with k distinct groups of nodes in which nodes connect only with nodes from the other groups. In other words, there are only inter-group links, no intra-group links. These k groups are commonly called partitions. k-partite networks can have any property of a regular network, but they also designate the node ids that belong to each partition (group).

Usage

KPartiteNetwork(
  object,
  links,
  nodes,
  partitions = Partitions(),
  linkColorScheme = "none",
  variables = VariableMetadataList(),
  ...
)

Slots

links: LinkList object defining the links in the network.
nodes: NodeList object defining the nodes in the network. Some nodes may not have any links.
linkColorScheme: string defining the type of coloring scheme the links follow. Options are 'none' (default) and 'posneg'. Use a method assignLinkColors() to assign colors to links and set this slot's value.
partitions: list of node ids that belong to each partition