Description Usage Format Source Examples
A simulated dataset used in the 'SWKM' vignette for illustration to perform weighted K-Means clustering.
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A list with three items:
a 100 by 5000 matrix, indicating 100 observations with 5000 features. Each element is a non-negative integer, which could be regarded as read counts.
true number of clusters.
a 100-dimension integer vector indicating the cluster each observation should be assigned to.
a 20-dimension integer vector indicating the positions of noisy observations. 90% of the features in the noisy observations are set to be 0, simulating missing values in real experiments.
Jason D Buenrostro, et al. (2015) Single-cell chromatin accessibility reveals principles of regulatory variation. Nature, 523(7561), 486-490.
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