plotSummary-MSstatsWeightedSummary-method: Plot summary for a given cluster or proteins set

In Vitek-Lab/SharedPeptidesExplorer: Weighted Protein-Level Summarization for Protein Clusters

Plot summary for a given cluster or proteins set

Description

Plot summary for a given cluster or proteins set

Usage

## S4 method for signature 'MSstatsWeightedSummary'
plotSummary(
  weighted_summary,
  cluster = NULL,
  proteins = NULL,
  channel_order = NULL
)

Arguments

weighted_summary	output of the getWeightedProteinSummary function
cluster	optional ID of a cluster to plot. Either 'cluster' or 'proteins' must be provided
proteins	optional vector of proteins to plot. Either 'cluster' or 'proteins' must be provided
channel_order	optional vector of ordered channel IDs. If provided, x-axis of the plot will follow this order

Value

ggplot2 object

Vitek-Lab/SharedPeptidesExplorer documentation built on April 14, 2025, 1:45 p.m.