build_query_url: Accessory function used to build the query url

In VoisinneG/queryup: Query the 'UniProtKB' REST API

Accessory function used to build the query url

Description

Accessory function used to build the query url

Usage

build_query_url(
  query = NULL,
  base_url = "https://rest.uniprot.org/uniprotkb/",
  columns = c("accession", "id", "gene_names", "organism_name", "reviewed"),
  format = "json"
)

Arguments

query	list of keys corresponding to UniProt's query fields. For example : list("gene_exact" = c("Pik3r1", "Pik3r2") , "organism" = c("10090", "9606"), "reviewed" = "yes")
base_url	The base url for the UniProt REST API
columns	names of UniProt data columns to retrieve.
format	format of the response provided by the UniProt API

Value

the query url

VoisinneG/queryup documentation built on June 30, 2023, 2:05 a.m.