toUniformat: Creates a Uniformat file from a dataframe

In WLemieux03/uniffstat: Implementation for using Gene[Rate] output to compute Hierarchical F-Statistics based on hierfstat

Creates a Uniformat file from a dataframe

Description

Creates a .unif file containing the genetic infomation from a dataframe

Usage

toUniformat(typing, fname=NULL, loci=c('A', 'B', 'C', 'DRB1', 'DQB1', 'DPB1'), dict=NULL)

Arguments

typing	a dataframe with first column [IND] the identifiers and the allele information in paired locus columns (Locus_1, Locus_2); unknown alleles should be [NA]
fname	an optional filename to save the output; if [NULL]the output will be returned instead
loci	the loci to be exported in the Uniformat file
dict	the list dictionary containing the correspondence of ambiguous alleles

Value

res Uniformat formatted data

Author(s)

William Lemieux [e-mail]

WLemieux03/uniffstat documentation built on May 3, 2022, 3:03 p.m.