Bobro-class: The Bobro Class

Description Slots

Description

The Bobro object is a representation of DNA sequences and ChIP assay data for R; The object was designed to be as self-contained as possible, and easily extendible to new methods.

Slots

assays

A list of assays for this project

meta_data

Contains meta-information about each cell, starting with number of genes detected (nGene) and the original identity class (orig.ident); more information is added using AddMetaData

graphs

A list of Graph-class objects

neighbors

...

approximations

A list of matrix approximations for this object

project.name

Name of the project

misc

A list of miscellaneous information

version

Version of Bobro this object was built under

commands

A list of logged commands run on this Bobro object

tools

A list of miscellaneous data generated by other tools, should be filled by developers only using Tool<-

parameters

A list of parameters run on this Bobro object


Wang-Cankun/Bobro documentation built on Feb. 23, 2020, 5:40 a.m.