download: Download from GISAID
In Wytamma/GISAIDR: R wrapper for GISAID "API"
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Download from GISAID
Description
Download from GISAID
Usage
download(
credentials,
list_of_accession_ids,
get_sequence = FALSE,
clean_up = TRUE
)
Arguments
credentials
GISAID credentials.
list_of_accession_ids
list of accession_id from GISAID
get_sequence
load sequences into data.frame after download
clean_up
delete downloaded files (e.g. fasta files) after download
Value
data.frame of complete data
Wytamma/GISAIDR documentation built on April 14, 2025, 1:50 p.m.
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| download | R Documentation |
Download from GISAID
Description
Download from GISAID
Usage
download(
credentials,
list_of_accession_ids,
get_sequence = FALSE,
clean_up = TRUE
)
Arguments
credentials |
GISAID credentials. |
list_of_accession_ids |
list of accession_id from GISAID |
get_sequence |
load sequences into data.frame after download |
clean_up |
delete downloaded files (e.g. fasta files) after download |
Value
data.frame of complete data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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