plot_venn: venn plot

In XikunHan/geneticToolBox: Tools for genomic data analysis

venn plot

Description

A wrapper function of venn plot. save_plot in different formats, including pdf, tiff, eps, and png (different journals may require different formats).

Usage

plot_venn(
  x,
  color = NULL,
  category.names = NULL,
  filename = NULL,
  imagetype = "png",
  height = 800,
  width = 1200,
  units = "px",
  resolution = 300,
  compression = "lzw",
  lwd = 3,
  lty = "blank",
  fill = color,
  cex = 0.8,
  fontfamily = "sans",
  cat.cex = 0.8,
  cat.default.pos = "outer",
  cat.pos = c(0, 0, 0, 0, 0, 0, 0),
  cat.dist = c(0.1, 0.1, 0.1, 0.1, 0.1, 0.1, 0.1)
)

Arguments

x	A list of data.
color	color for the venn, default is Set1 from brewer.pal.
category.names	label, default is the names in the list.
filename	file name to save
imagetype	"png" or "tiff"
height	default value 800
width	default value 1200
units	default value "px",
resolution	default value 300
compression	default value "lzw"
lwd	default value 3,
lty	default value 'blank',
fill	default value is the same as color
cex	default value .8,
fontfamily	default value "sans",
cat.cex	default value 0.8,
cat.default.pos	default value "outer",
cat.pos	default value c(0, 0, 0, 0, 0, 0, 0),
cat.dist	default value c(0.1, 0.1, 0.1, 0.1, 0.1,0.1, 0.1)

XikunHan/geneticToolBox documentation built on Jan. 3, 2023, 4:12 a.m.